de5223a3b3915b7dfcbde740e4dad377 *DESCRIPTION
3ab103442e49de45ffeee91e4f7294bf *NAMESPACE
c8c16b713ca3af5a0d9e5b2d3367a012 *NEWS.md
49cefb5f5f768b88c6093cb5e1c2f65d *R/RcppExports.R
881db11bf8365eec94ae2c9ddac949fa *R/classesAndMethods.R
de2bd558f0b4120acaaf8872ca2299f2 *R/ctmcClassesAndMethods.R
dd1b32d70c815fba2dc51c2e394a7466 *R/ctmcProbabilistic.R
8c7ce890d00d92ce802b378a2bcf1dfd *R/data.R
3116a18839fae9568c057505eb25ccb5 *R/fitHigherOrder.R
0be873b92b60f1099954ecdd2345a910 *R/fittingFunctions.R
32c413f1c457723a305d4e82fe9088cb *R/hommc.R
bb6f8cb8b1b14646a5985b7ab7f4d003 *R/markovchain.R
2fa8aca8212bfacdd1524bd97f3c4e5c *R/matlab_package_functions.R
c173f5676e42f00709b9423416bfd27e *R/probabilistic.R
8c90c159a9489b0f5dfb8ce08e0495e8 *R/random.R
41fc8f8e9367fd173a69c2f7feebfc3a *R/statisticalTests.R
e410e126a607f82b722bf9db2558980a *R/supplementaryPlot.R
f71c145460e7fe6f0fba2fc172079109 *R/sysdata.rda
39b735feac8bc2ead976b8f9d61db649 *R/utils.R
db74c50b2544eddf346897e1a7a1e11d *R/zzz.R
e2c9fc2f3dc6fc68efe5c992e9319d4b *README.md
abe7b0869468869a6daa35950e1f6563 *build/vignette.rds
80a869791cc3637d493c5454a9190cdb *data/blanden.rda
7a5ade8f78b95ee114dc2baad3a25546 *data/craigsendi.rda
e2679f6d0b04e374493c5d5358e8ca97 *data/holson.rda
c405e83d2f9a8322f829b97ab88a196a *data/kullback.rda
cbbf1e7cc83fc7ed54489c6a89052ddd *data/preproglucacon.rda
dc573c904a457746724cc6c0b9cab0f1 *data/rain.rda
abb60d8515fd8c2793e58d2d4f8c2170 *data/sales.rda
bb5f03025f8b2cc2c5a1bb2cad294ba2 *data/tm_abs.rda
7062e44a453478115862d4383d21b1aa *demo/00Index
341e2275587b8537b7a3817aaf3588a4 *demo/bard.R
1700f0b961dc53993a9686ce375b2f06 *demo/computationTime.R
dbf49ba2e9ce80d4d1f034650764a231 *demo/examples.R
fb3046e24980a921d79cba3c3ef6f3b0 *demo/extractMatrices.R
89142f6fd07792388e74fd69002dffeb *demo/mathematica.R
837a7db4def223b7ba17ba93f52039f5 *demo/quasiBayesian.R
1dc619850b52023f072249b66f191b92 *demo/quickStart.R
9b61f7557c1e6c863affd1bc5f07480e *demo/reliability.R
4412e3c1ae45e06dc3dc41779424a939 *inst/CITATION
632f364e57455c2fefa03a63d7815b2e *inst/doc/an_introduction_to_markovchain_package.R
8a11333984962f003ab0d0806f8da8a1 *inst/doc/an_introduction_to_markovchain_package.Rmd
04e53720849468b5982b549e7be4a3a0 *inst/doc/an_introduction_to_markovchain_package.pdf
4b3b3806c112ae0147a4662161165b24 *inst/doc/gsoc_2017_additions.R
263029ac4cc9bc8b12ab1d8c7dffd3df *inst/doc/gsoc_2017_additions.Rmd
7e89d622f891fa4faf4fe4a3e622389b *inst/doc/gsoc_2017_additions.pdf
e70605cb8e702fa464278f845ad14bc8 *inst/doc/higher_order_markov_chains.R
6039ddc13e6d4e61f10f3eddb0fbbe9f *inst/doc/higher_order_markov_chains.Rmd
abdc9f1413161cabb541453d75797190 *inst/doc/higher_order_markov_chains.pdf
730fbb92cced04056c80f883f3566252 *inst/extdata/ltdItaData.txt
75bf84bd1d2c1ad2c18b97199443d27f *man/ExpectedTime.Rd
3a7587d2c12ba2a1652ad7e38cc69443 *man/HigherOrderMarkovChain-class.Rd
2207974462e269879736e2aa4f45f3bf *man/absorptionProbabilities.Rd
984657ac88a51f09cd8013b2ad5ccf81 *man/blanden.Rd
515e8fd8bfffcfe1cf5349200a7682a6 *man/committorAB.Rd
6a4eb256b4f993212a37f877712edf59 *man/conditionalDistribution.Rd
cd4830df7e3f9ab722d4edb724aa9c1e *man/craigsendi.Rd
84d44f1e1dae8840ee345b2368ebede6 *man/ctmc-class.Rd
7b1edcd40aab0fa00c37a2b8b0a32588 *man/ctmcFit.Rd
1a601c7098ade1f736a926f7e33bb90b *man/expectedRewards.Rd
13ef966850f4dae14aaa7221b1181720 *man/expectedRewardsBeforeHittingA.Rd
aff4c6974caafc84c7d410d6d706ad62 *man/firstPassage.Rd
bbaac4bed94a47e88deacbf976b86e9e *man/firstPassageMultiple.Rd
d2c9c7016cb65119ae51207965beac19 *man/fitHighOrderMultivarMC.Rd
5a78cb9d6722f1b978c563cfe7a7587f *man/fitHigherOrder.Rd
11f3ca6a0117afde424469092c385e59 *man/freq2Generator.Rd
dad43a04be77e9a9b7ae1d3a9fb7a495 *man/generatorToTransitionMatrix.Rd
c9840a546f9357451f76ca09b23a0bd8 *man/getName.Rd
cf61b91702f4f73d44e9fd5608ca4d65 *man/hittingProbabilities.Rd
add6fde771cc5bf6c02827ea3536fc96 *man/holson.Rd
a46092594d426a3bedb4bd1782da2da2 *man/hommc-class.Rd
297096be86b88ebeaabd6ee7ed0a6486 *man/hommc-show.Rd
10dbf12cf0346f0054d567cd09fb65ff *man/ictmc-class.Rd
592eb7fba6781dfdcee2d2dff82df000 *man/impreciseProbabilityatT.Rd
eb6b353a91450ff5674cb25090d46d70 *man/inferHyperparam.Rd
db14356077967b114596ac92021a8a20 *man/is.CTMCirreducible.Rd
61cd70542034adea9588515a291dc19c *man/is.TimeReversible.Rd
4dceef72c917d3e66e97adfd880435c9 *man/is.accessible.Rd
93a3d28c78d94b800997dc44077bd480 *man/is.irreducible.Rd
df3496a2d6e96dd76409386c6d3f40f0 *man/is.regular.Rd
44c9b0250b8fd6a2e46bcd0a8545f59b *man/kullback.Rd
f1ac77afa05488dc787ef87ce5a9074e *man/markovchain-class.Rd
8228623ca2f6df6df80b83f76fce0a4f *man/markovchain.Rd
550130443105af8219ecc8fabbb62811 *man/markovchainFit.Rd
c3c1420c4aec6d3ee30ff46f68756329 *man/markovchainList-class.Rd
16c1cbb7705b17ebb518f1106583dfa2 *man/markovchainListFit.Rd
9be58105d48ce7cbefa8ad420a47f2c0 *man/markovchainSequence.Rd
abbaca484a9abb47564201cf4dd69834 *man/meanAbsorptionTime.Rd
a26bc397e9698f97f458b3af618a88b3 *man/meanFirstPassageTime.Rd
3f11047d088c7d3e5848c6dca4c02493 *man/meanNumVisits.Rd
a51431e1948ef165709ff5329b469948 *man/meanRecurrenceTime.Rd
2f53a77e485cefec6a31883806563a7e *man/multinomialConfidenceIntervals.Rd
5fa42ddb7efca956e8e6c354bced7302 *man/names.Rd
c7d4ada0e1a238d53ec005b32d93515f *man/noofVisitsDist.Rd
3e2482fe20053c54b008d4a4393ce5c1 *man/ones.Rd
f371b228dbd222f85535f1d4c9219b43 *man/predictHommc.Rd
fc9bb6a67bee60dda7b4dad14bf7f3ca *man/predictiveDistribution.Rd
29a6c0777531665ad64fc774c6e87e25 *man/preproglucacon.Rd
d1755ab27b558f63b9e740af441f7777 *man/priorDistribution.Rd
80fbd5430cc4b8d68d031b1424b62a75 *man/probabilityatT.Rd
4817c2004dc1ac01c19cc8f9a3212b45 *man/rain.Rd
9d4ee477a6139b177ed5d218b12e7fb3 *man/rctmc.Rd
954bc6c4ee8923a7ecec4928f121e9c1 *man/rmarkovchain.Rd
0c8479de816d083d212b802a03c6e802 *man/sales.Rd
4ba99b5946a10b828a943aeedf40e50a *man/setName.Rd
be0b6000cb92dc3757c227737ebcef4c *man/states.Rd
a28a8b97f9354cb3bf08733359978209 *man/statisticalTests.Rd
3825bbb52da090aae367cac4de6f13f0 *man/steadyStates.Rd
84702a1a7cdd752c4d65bdd9b2abb26c *man/structuralAnalysis.Rd
cc0565a34593f573e482e92783e6cd27 *man/tm_abs.Rd
b60ba3fe4b6b18d4e99878b7b259562a *man/transition2Generator.Rd
19d5e66645633e19a90cd83e3049b0c9 *man/transitionProbability.Rd
85575509f03f4a18367e077392a9572a *man/zeros.Rd
a1e86627020c43852446a8e2c2141b3f *src/Makevars
a1e86627020c43852446a8e2c2141b3f *src/Makevars.win
4c8bf0a3e340b7aa84647f337918e08b *src/RcppExports.cpp
4b77a04f31755a0fc89baed5d50c8aca *src/classesAndMethods.cpp
e28005d65e2b51dac4973cb40de229b5 *src/ctmcClassesAndMethods.cpp
100a776c9e36949f4bc77fa3467ba1b6 *src/ctmcFittingFunctions.cpp
02ce3f3715895ea5a19302312ea0eabf *src/ctmcProbabilistic.cpp
d99e875a963f6fbaf1734b3470ca67fb *src/fitHigherOrder.cpp
54d343f821d5ba9f3ec7dd600d4cc830 *src/fittingFunctions.cpp
8c9f0905b63553383414ccbbf6dfbea5 *src/helpers.h
723761dbfb6fbf1cad9db40ef8dcfcf7 *src/mapFitFunctions.h
671ba94f3c19dc66524665fd56d2b82c *src/multinomCI.cpp
693f21d800e439415365d7d75ca318a5 *src/probabilistic.cpp
8118d2d4fb74432e8cee34693663e394 *src/utils.cpp
9ca86bdb9770b1d4f09faaccd4b207c0 *tests/testthat.R
8702f384348e3b3a74de2ba9d8bd5f46 *tests/testthat/testBasic1.R
95866d62c44f628264aac082f16f8562 *tests/testthat/testFits.R
8cf73c40b5fad4c821665d3a8855a460 *tests/testthat/testHigherOrder.R
c6b1cc046d56e93de12430fa159cca00 *tests/testthat/testMultinomCI.R
76426c64e1f40feec3af8d9efe2b77fc *tests/testthat/testPeriod.R
e34d2232b7de26561a344cba7eaa83bc *tests/testthat/testPlot.R
9fda6f42d517e727c4a080c8a1fe8baf *tests/testthat/testStatesClassification.R
201a49d2650e0f94a431772ac391da40 *tests/testthat/testctmc.R
8a11333984962f003ab0d0806f8da8a1 *vignettes/an_introduction_to_markovchain_package.Rmd
263029ac4cc9bc8b12ab1d8c7dffd3df *vignettes/gsoc_2017_additions.Rmd
6039ddc13e6d4e61f10f3eddb0fbbe9f *vignettes/higher_order_markov_chains.Rmd
c19f024e4ed601bd7796030986ef807b *vignettes/markovchainBiblio.bib
057d08248e65d85ee90839f9c2e6ba4f *vignettes/template.tex
